Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891054.1_cds_XP_016445754.1_40684
CDS Infomation

[gene=LOC107770942] [db_xref=GeneID:107770942] [protein=phosphoinositide phospholipase C 4-like] [protein_id=XP_016445754.1] [location=complement(join(2572..2865,3090..3176,3249..3401,4736..4853,4957..5168,5503..5757,5840..5975,7368..7564,9216..9530))] [gbkey=CDS]
Sequence

ATGGGGAGTTATAGAGTATGTGTATGTTTTACAAGAAAATTCAGAGTAACAGAAGCAGAG
CCACCATCAGATGTGAAAGAAGCATTCAAGAAATACACTGAAAATGGTAACCAAATGAAT
TCAGAACAGTTACTGAAATTCTTGATTGAAGTACAAGGAGAGACCCTTTTGACTGTTGGT
GATGCTGATGCCATTATTCGTCAGATCCTTCAGAAAAGACACCCCATTACTAAGTTAACT
CGTCAAACTCTTGCTCTTGAAGATTTTCATCATTTCCTCTTCAATACTGAACTTAATCCA
CCAATTAATTATAAGGTTCACCATGATATGAATGCTCCACTCTCCCATTATTTTATATTC
ACGGGGCATAATTCTTACTTGACTGGAAATCAGCTGACGAGTGATTGCAGTGACGTCCCA
ATTATGAAAGCGCTGAAAAAGGGTGTAAGGGTGATTGAGCTTGATATATGGCCAAATTCT
GACAAGGATGACATACACGTACTTCACGGAAGGACAGTGACAACCCCTGTGGAATTAATA
AGATGTCTCAAGTCAATAAAAGAACATGCTTTTGTGGCTTCTCCTTATCCTGTTGTAATT
ACACTGGAAGATCACCTAACACCTGATCTTCAGGCTAAAGTGGCTCAGATGCTCACTGAA
ACATTTGGAGAAATGCTCTTTGTTCCTGAATCAGATTCTCTAAAGGAATGCCCAACACCA
GAAGAACTAAAGCATCGTATAATTATTTCAACCAAACCTCCTAAAGAGTACCTTGAGGCC
AGTGCCAGCACTACTGCTAGTAAAGAGAGACGAAATAGCTCCCAAAGATCAAATTGTTCC
GAGGATGATGTATGGGGCACTGAACCTTCAAGCTTGACAGCTGATCAAGATGAAAATGAA
AAGAGCGACAGTGATAATTTTGAAGATGAAGATGACTCCAATCACAGACCACAGTTAGCA
TCTGCTTATAAACGCCTGATCGCCATCCATGCCGGGAAGCCTAAAGGTGGATTAAAGGAG
GCACTGAAAGTCGACCCTAATAAAGTAAGACGACTAAGTTTAAGTGAACAGGCTCTCGAA
AAGGCTGCCGAATCTCATGGGACGGAAATTGTGAGGTTCACGCAAAGAAACATTTTAAGG
GTGTATCCTAAAGGTACTAGGTTTAACTCATCCAACTACAAGCCACTAATTGGTTGGATG
CATGGAGCTCAGATGGTTGCATTTAACATGCAGGGATACGGTAGAGCGCTATGGTTGATG
CATGGGATGTTCAGGTCAAATGGAGGCTGTGGTTATGTTAAGAAGCCCGATTTCTTGCTG
AATGTTGGCCCTAATAATGAAGTTTTTGATCCTAAGGCAAAGTTGCCAGTTAAGAAAACC
TTAAAGGTGAAAGTATATATGGGAGATGGATGGCATTTGGATTTCAAACAAACACACTTT
GATTTGTATTCACCTCCGGACTTCTACACAAGGGTTGGGATAGCCGGAGTGCCTGCTGAT
GAGCTAATGAAGAAAACAAAGGCTAAAGAGGATAAATGGACGCCAGTTTGGGATGAAGAA
TTTACCTTCCCATTAACTGTGCCCGAATTAGCTTTGCTGCGAATTGAAGTACACGAGTAC
GACATGTCAGAGAAGGATGATTTTGCAGGCCAAACATGTATACCTGTTTCCGAGTTGAAA
CCTGGGATTCATGCAGTTCCTCTTTGTGACCGAAAAGGTGAGAAATATAGTTCCGCGAGG
CTACTCATGCGCTTTGAGTTTGTATAA

Peptide Sequence

PEP ID

XP_016445754.1
PEP Infomation

PREDICTED: phosphoinositide phospholipase C 4-like [Nicotiana tabacum]
Sequence

MGSYRVCVCFTRKFRVTEAEPPSDVKEAFKKYTENGNQMNSEQLLKFLIEVQGETLLTVG
DADAIIRQILQKRHPITKLTRQTLALEDFHHFLFNTELNPPINYKVHHDMNAPLSHYFIF
TGHNSYLTGNQLTSDCSDVPIMKALKKGVRVIELDIWPNSDKDDIHVLHGRTVTTPVELI
RCLKSIKEHAFVASPYPVVITLEDHLTPDLQAKVAQMLTETFGEMLFVPESDSLKECPTP
EELKHRIIISTKPPKEYLEASASTTASKERRNSSQRSNCSEDDVWGTEPSSLTADQDENE
KSDSDNFEDEDDSNHRPQLASAYKRLIAIHAGKPKGGLKEALKVDPNKVRRLSLSEQALE
KAAESHGTEIVRFTQRNILRVYPKGTRFNSSNYKPLIGWMHGAQMVAFNMQGYGRALWLM
HGMFRSNGGCGYVKKPDFLLNVGPNNEVFDPKAKLPVKKTLKVKVYMGDGWHLDFKQTHF
DLYSPPDFYTRVGIAGVPADELMKKTKAKEDKWTPVWDEEFTFPLTVPELALLRIEVHEY
DMSEKDDFAGQTCIPVSELKPGIHAVPLCDRKGEKYSSARLLMRFEFV

Transcript Sequence

Gene sequence data has not been registered.